Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.44□□□□□ -0.42
P04224 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
P04224 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.44□□□□□ -0.42
P04224 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.44□□□□□ -0.42
P04224 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.44□□□□□ -0.42
P04224 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.44□□□□□ -0.42
P04224 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.44□□□□□ -0.42
P04224 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
P04224 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
P04224 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
P04224 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
P04224 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
P04224 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.43□□□□□ -0.42
P04224 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
P04224 Gm4535-201ENSMUST00000182274 558 ntBASIC12.43□□□□□ -0.42
P04224 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.43□□□□□ -0.42
P04224 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Gm10355-201ENSMUST00000097146 517 ntBASIC12.43□□□□□ -0.42
P04224 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
P04224 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
P04224 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
P04224 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
P04224 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.42□□□□□ -0.42
P04224 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
P04224 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
P04224 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Gm11780-201ENSMUST00000136880 516 ntBASIC12.42□□□□□ -0.42
P04224 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.42□□□□□ -0.42
P04224 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
P04224 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
P04224 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms