Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
TcraP01849 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.35□□□□□ -0.75
TcraP01849 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
TcraP01849 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Gm4459-201ENSMUST00000118750 468 ntBASIC10.34□□□□□ -0.75
TcraP01849 Gm15372-201ENSMUST00000120729 834 ntBASIC10.34□□□□□ -0.75
TcraP01849 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.34□□□□□ -0.75
TcraP01849 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.34□□□□□ -0.75
TcraP01849 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.34□□□□□ -0.75
TcraP01849 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.34□□□□□ -0.75
TcraP01849 Gm18622-201ENSMUST00000219361 595 ntBASIC10.34□□□□□ -0.75
TcraP01849 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.34□□□□□ -0.75
TcraP01849 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.34□□□□□ -0.75
TcraP01849 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
TcraP01849 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
TcraP01849 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
TcraP01849 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.34□□□□□ -0.75
TcraP01849 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
TcraP01849 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
TcraP01849 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
TcraP01849 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.34□□□□□ -0.75
TcraP01849 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.34□□□□□ -0.75
TcraP01849 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
TcraP01849 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
TcraP01849 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
TcraP01849 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
TcraP01849 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.33□□□□□ -0.76
TcraP01849 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
TcraP01849 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
TcraP01849 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.33□□□□□ -0.76
TcraP01849 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.33□□□□□ -0.76
TcraP01849 Gm12895-201ENSMUST00000122214 226 ntBASIC10.33□□□□□ -0.76
TcraP01849 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Gm10499-201ENSMUST00000174094 934 ntBASIC10.33□□□□□ -0.76
TcraP01849 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
TcraP01849 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms