Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Cops4O88544 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.09□□□□□ -0.31
Cops4O88544 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops4O88544 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cops4O88544 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cops4O88544 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.08□□□□□ -0.31
Cops4O88544 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cops4O88544 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.08□□□□□ -0.31
Cops4O88544 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
Cops4O88544 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cops4O88544 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cops4O88544 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.08□□□□□ -0.32
Cops4O88544 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.08□□□□□ -0.32
Cops4O88544 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
Cops4O88544 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cops4O88544 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Cops4O88544 AV026068-213ENSMUST00000223675 1171 ntBASIC13.08□□□□□ -0.32
Cops4O88544 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.08□□□□□ -0.32
Cops4O88544 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.08□□□□□ -0.32
Cops4O88544 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cops4O88544 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.08□□□□□ -0.32
Cops4O88544 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.08□□□□□ -0.32
Cops4O88544 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cops4O88544 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cops4O88544 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cops4O88544 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cops4O88544 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cops4O88544 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Gm13884-201ENSMUST00000118103 829 ntBASIC13.07□□□□□ -0.32
Cops4O88544 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.07□□□□□ -0.32
Cops4O88544 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.07□□□□□ -0.32
Cops4O88544 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.07□□□□□ -0.32
Cops4O88544 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cops4O88544 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cops4O88544 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cops4O88544 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cops4O88544 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.06□□□□□ -0.32
Cops4O88544 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.06□□□□□ -0.32
Cops4O88544 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cops4O88544 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms