Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.74□□□□□ -0.05
Ttc3O88196 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.74□□□□□ -0.05
Ttc3O88196 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.74□□□□□ -0.05
Ttc3O88196 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.74□□□□□ -0.05
Ttc3O88196 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.74□□□□□ -0.05
Ttc3O88196 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ttc3O88196 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ttc3O88196 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.73□□□□□ -0.05
Ttc3O88196 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ttc3O88196 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ttc3O88196 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.73□□□□□ -0.05
Ttc3O88196 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.73□□□□□ -0.05
Ttc3O88196 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.73□□□□□ -0.05
Ttc3O88196 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.73□□□□□ -0.05
Ttc3O88196 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.73□□□□□ -0.05
Ttc3O88196 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ttc3O88196 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.73□□□□□ -0.05
Ttc3O88196 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ttc3O88196 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ttc3O88196 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ttc3O88196 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ttc3O88196 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.72□□□□□ -0.05
Ttc3O88196 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Gm27772-201ENSMUST00000184900 187 ntBASIC14.72□□□□□ -0.05
Ttc3O88196 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ttc3O88196 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ttc3O88196 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.72□□□□□ -0.05
Ttc3O88196 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ttc3O88196 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.71□□□□□ -0.05
Ttc3O88196 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ttc3O88196 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Ttc3O88196 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms