Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Ubr1O70481 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ubr1O70481 Gm9124-201ENSMUST00000191789 1092 ntBASIC18.04■□□□□ 0.48
Ubr1O70481 Gm9113-201ENSMUST00000192510 1018 ntBASIC18.04■□□□□ 0.48
Ubr1O70481 Gm9131-201ENSMUST00000193557 1089 ntBASIC18.04■□□□□ 0.48
Ubr1O70481 Gm9121-201ENSMUST00000193749 1071 ntBASIC18.04■□□□□ 0.48
Ubr1O70481 Gm45504-201ENSMUST00000211407 2107 ntBASIC18.04■□□□□ 0.48
Ubr1O70481 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 CU024892.2-201ENSMUST00000224608 832 ntBASIC18.04■□□□□ 0.48
Ubr1O70481 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Ubr1O70481 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.04■□□□□ 0.48
Ubr1O70481 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC18.04■□□□□ 0.48
Ubr1O70481 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ubr1O70481 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.03■□□□□ 0.48
Ubr1O70481 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.03■□□□□ 0.48
Ubr1O70481 Gm37922-201ENSMUST00000195596 455 ntBASIC18.03■□□□□ 0.48
Ubr1O70481 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Gm44974-201ENSMUST00000206387 1279 ntBASIC18.03■□□□□ 0.48
Ubr1O70481 AC159896.2-201ENSMUST00000214753 269 ntBASIC18.03■□□□□ 0.48
Ubr1O70481 AC154319.1-201ENSMUST00000216330 312 ntBASIC18.03■□□□□ 0.48
Ubr1O70481 AL589735.1-201ENSMUST00000224353 270 ntBASIC18.03■□□□□ 0.48
Ubr1O70481 Gm7399-201ENSMUST00000032395 858 ntBASIC18.03■□□□□ 0.48
Ubr1O70481 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC18.03■□□□□ 0.48
Ubr1O70481 Abhd6-203ENSMUST00000225234 1958 ntBASIC18.03■□□□□ 0.48
Ubr1O70481 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr1O70481 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ubr1O70481 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Gm11793-201ENSMUST00000120433 981 ntBASIC18.02■□□□□ 0.48
Ubr1O70481 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC18.02■□□□□ 0.48
Ubr1O70481 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC18.02■□□□□ 0.48
Ubr1O70481 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Ubr1O70481 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr1O70481 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ubr1O70481 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ubr1O70481 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC18.02■□□□□ 0.47
Ubr1O70481 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.02■□□□□ 0.47
Ubr1O70481 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ubr1O70481 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ubr1O70481 Gm2639-201ENSMUST00000156881 1297 ntBASIC18.02■□□□□ 0.47
Ubr1O70481 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.02■□□□□ 0.47
Ubr1O70481 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC18.02■□□□□ 0.47
Ubr1O70481 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ubr1O70481 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ubr1O70481 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.01■□□□□ 0.47
Ubr1O70481 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC18.01■□□□□ 0.47
Ubr1O70481 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC18.01■□□□□ 0.47
Ubr1O70481 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Ubr1O70481 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.01■□□□□ 0.47
Ubr1O70481 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.01■□□□□ 0.47
Ubr1O70481 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Gm37497-201ENSMUST00000195830 798 ntBASIC18.01■□□□□ 0.47
Ubr1O70481 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC18.01■□□□□ 0.47
Ubr1O70481 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ubr1O70481 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.01■□□□□ 0.47
Ubr1O70481 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ubr1O70481 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr1O70481 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms