Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trdmt1O55055 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trdmt1O55055 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.53■□□□□ 0.08
Trdmt1O55055 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trdmt1O55055 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Gm12485-201ENSMUST00000119641 291 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Gm27847-201ENSMUST00000183711 107 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Gm27375-201ENSMUST00000183799 107 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Gm45784-201ENSMUST00000188360 142 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Gm6983-201ENSMUST00000214912 628 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trdmt1O55055 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.53■□□□□ 0.08
Trdmt1O55055 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.53■□□□□ 0.08
Trdmt1O55055 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.53■□□□□ 0.08
Trdmt1O55055 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Trdmt1O55055 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Trdmt1O55055 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trdmt1O55055 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Trdmt1O55055 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trdmt1O55055 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.52■□□□□ 0.08
Trdmt1O55055 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trdmt1O55055 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.52■□□□□ 0.08
Trdmt1O55055 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trdmt1O55055 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.52■□□□□ 0.08
Trdmt1O55055 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trdmt1O55055 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trdmt1O55055 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.52■□□□□ 0.08
Trdmt1O55055 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.52■□□□□ 0.08
Trdmt1O55055 Gm6091-201ENSMUST00000098307 165 ntBASIC15.52■□□□□ 0.08
Trdmt1O55055 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trdmt1O55055 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trdmt1O55055 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trdmt1O55055 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trdmt1O55055 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trdmt1O55055 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.52■□□□□ 0.07
Trdmt1O55055 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trdmt1O55055 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trdmt1O55055 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trdmt1O55055 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.51■□□□□ 0.07
Trdmt1O55055 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trdmt1O55055 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.51■□□□□ 0.07
Trdmt1O55055 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Gm14660-201ENSMUST00000119809 575 ntBASIC15.51■□□□□ 0.07
Trdmt1O55055 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trdmt1O55055 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.51■□□□□ 0.07
Trdmt1O55055 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trdmt1O55055 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trdmt1O55055 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdmt1O55055 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdmt1O55055 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trdmt1O55055 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdmt1O55055 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdmt1O55055 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdmt1O55055 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trdmt1O55055 Snora78-201ENSMUST00000158630 128 ntBASIC15.5■□□□□ 0.07
Trdmt1O55055 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trdmt1O55055 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trdmt1O55055 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trdmt1O55055 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.5■□□□□ 0.07
Trdmt1O55055 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms