Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Stx1aO35526 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.92■□□□□ 0.14
Stx1aO35526 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Stx1aO35526 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.92■□□□□ 0.14
Stx1aO35526 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.92■□□□□ 0.14
Stx1aO35526 Gm15483-201ENSMUST00000120338 456 ntBASIC15.92■□□□□ 0.14
Stx1aO35526 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Mir5126-201ENSMUST00000175513 77 ntBASIC15.92■□□□□ 0.14
Stx1aO35526 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.92■□□□□ 0.14
Stx1aO35526 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.92■□□□□ 0.14
Stx1aO35526 Gm21362-201ENSMUST00000194272 928 ntBASIC15.92■□□□□ 0.14
Stx1aO35526 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.92■□□□□ 0.14
Stx1aO35526 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.92■□□□□ 0.14
Stx1aO35526 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.92■□□□□ 0.14
Stx1aO35526 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.92■□□□□ 0.14
Stx1aO35526 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Stx1aO35526 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Stx1aO35526 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Stx1aO35526 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stx1aO35526 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Stx1aO35526 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Stx1aO35526 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Stx1aO35526 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.91■□□□□ 0.14
Stx1aO35526 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.91■□□□□ 0.14
Stx1aO35526 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.91■□□□□ 0.14
Stx1aO35526 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Stx1aO35526 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.91■□□□□ 0.14
Stx1aO35526 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stx1aO35526 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Stx1aO35526 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Stx1aO35526 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.9■□□□□ 0.14
Stx1aO35526 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Stx1aO35526 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.9■□□□□ 0.14
Stx1aO35526 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.9■□□□□ 0.14
Stx1aO35526 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Stx1aO35526 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Stx1aO35526 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Stx1aO35526 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Stx1aO35526 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Stx1aO35526 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stx1aO35526 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Stx1aO35526 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stx1aO35526 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.89■□□□□ 0.13
Stx1aO35526 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stx1aO35526 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Stx1aO35526 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Stx1aO35526 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Stx1aO35526 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stx1aO35526 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stx1aO35526 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Stx1aO35526 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.89■□□□□ 0.13
Stx1aO35526 Gm9385-201ENSMUST00000117563 472 ntBASIC15.89■□□□□ 0.13
Stx1aO35526 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Stx1aO35526 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms