Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pkd1O08852 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Pkd1O08852 Abhd6-203ENSMUST00000225234 1958 ntBASIC8.71□□□□□ -1.01
Pkd1O08852 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pkd1O08852 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pkd1O08852 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.01
Pkd1O08852 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Pkd1O08852 Gm2260-201ENSMUST00000184965 657 ntBASIC8.71□□□□□ -1.01
Pkd1O08852 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC8.71□□□□□ -1.01
Pkd1O08852 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC8.71□□□□□ -1.01
Pkd1O08852 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pkd1O08852 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Pkd1O08852 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pkd1O08852 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pkd1O08852 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Pkd1O08852 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Gm3508-201ENSMUST00000186012 792 ntBASIC8.71□□□□□ -1.02
Pkd1O08852 Gm38144-201ENSMUST00000192790 465 ntBASIC8.71□□□□□ -1.02
Pkd1O08852 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC8.71□□□□□ -1.02
Pkd1O08852 AC140293.1-201ENSMUST00000225626 1247 ntBASIC8.71□□□□□ -1.02
Pkd1O08852 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Pkd1O08852 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Pkd1O08852 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.71□□□□□ -1.02
Pkd1O08852 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Gm12403-201ENSMUST00000121384 959 ntBASIC8.71□□□□□ -1.02
Pkd1O08852 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Gm4335-201ENSMUST00000182581 1004 ntBASIC8.71□□□□□ -1.02
Pkd1O08852 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC8.71□□□□□ -1.02
Pkd1O08852 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Pkd1O08852 Gm9347-201ENSMUST00000211473 1607 ntBASIC8.71□□□□□ -1.02
Pkd1O08852 AC167669.2-201ENSMUST00000224417 1620 ntBASIC8.71□□□□□ -1.02
Pkd1O08852 CU062626.3-201ENSMUST00000225522 1411 ntBASIC8.7□□□□□ -1.02
Pkd1O08852 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Pkd1O08852 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Pkd1O08852 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Pkd1O08852 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm16479-201ENSMUST00000121706 932 ntBASIC8.7□□□□□ -1.02
Pkd1O08852 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC8.7□□□□□ -1.02
Pkd1O08852 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm44545-201ENSMUST00000208262 746 ntBASIC8.7□□□□□ -1.02
Pkd1O08852 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm20632-201ENSMUST00000176760 2427 ntBASIC8.7□□□□□ -1.02
Pkd1O08852 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm14130-201ENSMUST00000118417 987 ntBASIC8.7□□□□□ -1.02
Pkd1O08852 Gm4760-201ENSMUST00000119663 1030 ntBASIC8.7□□□□□ -1.02
Pkd1O08852 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC8.7□□□□□ -1.02
Pkd1O08852 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
Pkd1O08852 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pkd1O08852 AC126549.2-201ENSMUST00000223997 1976 ntBASIC8.7□□□□□ -1.02
Pkd1O08852 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Pkd1O08852 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Pkd1O08852 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC8.69□□□□□ -1.02
Pkd1O08852 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Pkd1O08852 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms