Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Gm14859-201ENSMUST00000117752 357 ntBASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim55G3X8Y1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Gm25925-201ENSMUST00000158314 306 ntBASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim55G3X8Y1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Gm27389-201ENSMUST00000183622 195 ntBASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim55G3X8Y1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms