Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.28□□□□□ -0.28
Colca2F8VPY8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Mir877-201ENSMUST00000104738 85 ntBASIC13.28□□□□□ -0.28
Colca2F8VPY8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Gm37497-201ENSMUST00000195830 798 ntBASIC13.28□□□□□ -0.28
Colca2F8VPY8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.28□□□□□ -0.28
Colca2F8VPY8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Colca2F8VPY8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Colca2F8VPY8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Colca2F8VPY8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm37259-201ENSMUST00000193903 849 ntBASIC13.27□□□□□ -0.29
Colca2F8VPY8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm45865-201ENSMUST00000211815 945 ntBASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.27□□□□□ -0.29
Colca2F8VPY8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Colca2F8VPY8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.27□□□□□ -0.29
Colca2F8VPY8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.27□□□□□ -0.29
Colca2F8VPY8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Colca2F8VPY8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.27□□□□□ -0.29
Colca2F8VPY8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Colca2F8VPY8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 Gm12241-201ENSMUST00000118330 726 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Gm25927-201ENSMUST00000175058 117 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 Carlr-201ENSMUST00000181515 2574 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Gm38144-201ENSMUST00000192790 465 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 Gm37922-201ENSMUST00000195596 455 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.26□□□□□ -0.29
Colca2F8VPY8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Colca2F8VPY8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms