Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.01□□□□□ -0.33
TprF6ZDS4 Nsd1-205ENSMUST00000224693 852 ntBASIC13.01□□□□□ -0.33
TprF6ZDS4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.01□□□□□ -0.33
TprF6ZDS4 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.01□□□□□ -0.33
TprF6ZDS4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TprF6ZDS4 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.01□□□□□ -0.33
TprF6ZDS4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
TprF6ZDS4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TprF6ZDS4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Gm45667-201ENSMUST00000210380 1316 ntBASIC13□□□□□ -0.33
TprF6ZDS4 Mir7654-201ENSMUST00000185082 70 ntBASIC13□□□□□ -0.33
TprF6ZDS4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13□□□□□ -0.33
TprF6ZDS4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13□□□□□ -0.33
TprF6ZDS4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TprF6ZDS4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TprF6ZDS4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13□□□□□ -0.33
TprF6ZDS4 Gm42632-201ENSMUST00000201707 2411 ntBASIC13□□□□□ -0.33
TprF6ZDS4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13□□□□□ -0.33
TprF6ZDS4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TprF6ZDS4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13□□□□□ -0.33
TprF6ZDS4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13□□□□□ -0.33
TprF6ZDS4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13□□□□□ -0.33
TprF6ZDS4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TprF6ZDS4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13□□□□□ -0.33
TprF6ZDS4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Gm5370-201ENSMUST00000187187 574 ntBASIC13□□□□□ -0.33
TprF6ZDS4 AC134335.2-201ENSMUST00000227660 440 ntBASIC13□□□□□ -0.33
TprF6ZDS4 AC126253.1-201ENSMUST00000227974 824 ntBASIC13□□□□□ -0.33
TprF6ZDS4 AC122459.1-201ENSMUST00000228373 885 ntBASIC13□□□□□ -0.33
TprF6ZDS4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13□□□□□ -0.33
TprF6ZDS4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TprF6ZDS4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13□□□□□ -0.33
TprF6ZDS4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.99□□□□□ -0.33
TprF6ZDS4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Gm37986-201ENSMUST00000193285 383 ntBASIC12.99□□□□□ -0.33
TprF6ZDS4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
TprF6ZDS4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 BC037039-201ENSMUST00000192003 2205 ntBASIC12.99□□□□□ -0.33
TprF6ZDS4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TprF6ZDS4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TprF6ZDS4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TprF6ZDS4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms