Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.68□□□□□ -0.38
Shank1D3YZU1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.67□□□□□ -0.38
Shank1D3YZU1 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.67□□□□□ -0.38
Shank1D3YZU1 Gm10012-201ENSMUST00000078252 192 ntBASIC12.67□□□□□ -0.38
Shank1D3YZU1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.67□□□□□ -0.38
Shank1D3YZU1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.67□□□□□ -0.38
Shank1D3YZU1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.67□□□□□ -0.38
Shank1D3YZU1 Gm43179-201ENSMUST00000198797 275 ntBASIC12.67□□□□□ -0.38
Shank1D3YZU1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shank1D3YZU1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.66□□□□□ -0.38
Shank1D3YZU1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.66□□□□□ -0.38
Shank1D3YZU1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.66□□□□□ -0.38
Shank1D3YZU1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.66□□□□□ -0.38
Shank1D3YZU1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shank1D3YZU1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shank1D3YZU1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms