Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm7775-201ENSMUST00000218871 853 ntBASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm9063-201ENSMUST00000223299 582 ntBASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm15460-201ENSMUST00000118147 391 ntBASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm13453-201ENSMUST00000118708 357 ntBASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm33320-201ENSMUST00000192232 530 ntBASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gm9229-201ENSMUST00000222777 126 ntBASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atg4a-psA0A0G2JFS9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms