Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm10275-201ENSMUST00000092620 635 ntBASIC11.62□□□□□ -0.55
Trav18A0A075B656 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.62□□□□□ -0.55
Trav18A0A075B656 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav18A0A075B656 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.61□□□□□ -0.55
Trav18A0A075B656 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.61□□□□□ -0.55
Trav18A0A075B656 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Gm9727-201ENSMUST00000161387 555 ntBASIC11.61□□□□□ -0.55
Trav18A0A075B656 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Gm5364-201ENSMUST00000216789 889 ntBASIC11.61□□□□□ -0.55
Trav18A0A075B656 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav18A0A075B656 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.61□□□□□ -0.55
Trav18A0A075B656 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav18A0A075B656 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav18A0A075B656 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.6□□□□□ -0.55
Trav18A0A075B656 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.6□□□□□ -0.55
Trav18A0A075B656 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Gm6973-201ENSMUST00000117080 721 ntBASIC11.6□□□□□ -0.55
Trav18A0A075B656 Gm15427-201ENSMUST00000117288 531 ntBASIC11.6□□□□□ -0.55
Trav18A0A075B656 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.6□□□□□ -0.55
Trav18A0A075B656 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.6□□□□□ -0.55
Trav18A0A075B656 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms