Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Gm15565-201ENSMUST00000118890 427 ntBASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav8-1A0A075B641 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav8-1A0A075B641 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.15□□□□□ -0.79
Trav8-1A0A075B641 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Trav8-1A0A075B641 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav8-1A0A075B641 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav8-1A0A075B641 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Gm45328-201ENSMUST00000210942 917 ntBASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav8-1A0A075B641 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms