Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb3S4R1G7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb3S4R1G7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Gm9385-201ENSMUST00000117563 472 ntBASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.77□□□□□ -0.37
H2afb3S4R1G7 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.77□□□□□ -0.37
H2afb3S4R1G7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb3S4R1G7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb3S4R1G7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms