Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.64■□□□□ 0.42
Hdac6Q9Z2V5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Gm5161-201ENSMUST00000075243 853 ntBASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.64■□□□□ 0.41
Hdac6Q9Z2V5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Gm8810-201ENSMUST00000172895 754 ntBASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac6Q9Z2V5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Proscos-202ENSMUST00000178990 666 ntBASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Gm42550-201ENSMUST00000201553 960 ntBASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Gm24447-201ENSMUST00000083977 338 ntBASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac6Q9Z2V5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Mir698-201ENSMUST00000102164 109 ntBASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Gm6152-201ENSMUST00000151704 340 ntBASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Gm27331-201ENSMUST00000183705 60 ntBASIC17.61■□□□□ 0.41
Hdac6Q9Z2V5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms