Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Gm9385-201ENSMUST00000117563 472 ntBASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Gm37230-201ENSMUST00000194491 818 ntBASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Skp2Q9Z0Z3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Gm14140-201ENSMUST00000119999 995 ntBASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Gm17968-201ENSMUST00000194902 784 ntBASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Gm45098-201ENSMUST00000207179 657 ntBASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Gm45747-201ENSMUST00000212203 999 ntBASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Skp2Q9Z0Z3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Skp2Q9Z0Z3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms