Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.55■□□□□ 0.24
Scn11aQ9R053 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.55■□□□□ 0.24
Scn11aQ9R053 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.55■□□□□ 0.24
Scn11aQ9R053 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.54■□□□□ 0.24
Scn11aQ9R053 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.54■□□□□ 0.24
Scn11aQ9R053 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.54■□□□□ 0.24
Scn11aQ9R053 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Gm13350-201ENSMUST00000120519 479 ntBASIC16.54■□□□□ 0.24
Scn11aQ9R053 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.54■□□□□ 0.24
Scn11aQ9R053 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn11aQ9R053 Gm10012-201ENSMUST00000078252 192 ntBASIC16.54■□□□□ 0.24
Scn11aQ9R053 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.53■□□□□ 0.24
Scn11aQ9R053 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.53■□□□□ 0.24
Scn11aQ9R053 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Gm17794-201ENSMUST00000220252 955 ntBASIC16.53■□□□□ 0.24
Scn11aQ9R053 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn11aQ9R053 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.52■□□□□ 0.24
Scn11aQ9R053 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Scn11aQ9R053 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.52■□□□□ 0.23
Scn11aQ9R053 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms