Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rtn3Q9ES97 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Gm25948-201ENSMUST00000175334 112 ntBASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Gm38225-201ENSMUST00000194001 393 ntBASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.13■□□□□ 0.01
Rtn3Q9ES97 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 AA543401-201ENSMUST00000164248 1269 ntBASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.12■□□□□ 0.01
Rtn3Q9ES97 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rtn3Q9ES97 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn3Q9ES97 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms