Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Gm29705-201ENSMUST00000212598 474 ntBASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Gm8598-201ENSMUST00000221184 836 ntBASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Gm1335-201ENSMUST00000121653 386 ntBASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Gm43758-201ENSMUST00000199500 367 ntBASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Gm18753-201ENSMUST00000201000 566 ntBASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-4Q9EQM3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-4Q9EQM3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Gm26083-201ENSMUST00000157904 193 ntBASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Gm27772-201ENSMUST00000184900 187 ntBASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Gm18473-201ENSMUST00000220543 868 ntBASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-4Q9EQM3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms