Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bl1Q9D701 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Gm6546-201ENSMUST00000192096 766 ntBASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bl1Q9D701 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Gm6296-201ENSMUST00000222599 943 ntBASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bl1Q9D701 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms