Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Olfr286-202ENSMUST00000205305 969 ntBASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Gm45167-201ENSMUST00000208007 322 ntBASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim13Q9CYB0 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.1□□□□□ -0.31
Trim13Q9CYB0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.1□□□□□ -0.31
Trim13Q9CYB0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.1□□□□□ -0.31
Trim13Q9CYB0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms