Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ssr1Q9CY50 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ssr1Q9CY50 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm16026-204ENSMUST00000162652 683 ntBASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm5177-201ENSMUST00000183092 997 ntBASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm27741-201ENSMUST00000185060 237 ntBASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm2451-201ENSMUST00000199447 999 ntBASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm10290-201ENSMUST00000200451 999 ntBASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Ssr1Q9CY50 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Rab3c-202ENSMUST00000223922 2398 ntBASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Gm14140-201ENSMUST00000119999 995 ntBASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.41■□□□□ 0.06
Ssr1Q9CY50 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms