Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Gm20049-201ENSMUST00000219950 730 ntBASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Odf3b-204ENSMUST00000227834 930 ntBASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pfdn1Q9CWM4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn1Q9CWM4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Gm16061-201ENSMUST00000122167 857 ntBASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Gm3375-201ENSMUST00000203929 796 ntBASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn1Q9CWM4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms