Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lsm7Q9CQQ8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Gm21470-201ENSMUST00000187680 696 ntBASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Gm5425-201ENSMUST00000214125 459 ntBASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Gm6218-201ENSMUST00000219812 628 ntBASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lsm7Q9CQQ8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Gm4804-201ENSMUST00000182234 999 ntBASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm7Q9CQQ8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Gm9797-201ENSMUST00000052902 613 ntBASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lsm7Q9CQQ8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms