Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Mzt1-203ENSMUST00000227948 952 ntBASIC13.41□□□□□ -0.26
Ska1Q9CPV1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ska1Q9CPV1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Olfr286-202ENSMUST00000205305 969 ntBASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska1Q9CPV1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Ska1Q9CPV1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.4□□□□□ -0.27
Ska1Q9CPV1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ska1Q9CPV1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.27
Ska1Q9CPV1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska1Q9CPV1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms