Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh15Q99PJ1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Gm30285-201ENSMUST00000214614 422 ntBASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh15Q99PJ1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gm15782-201ENSMUST00000121073 445 ntBASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gm38144-201ENSMUST00000192790 465 ntBASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Gm2260-201ENSMUST00000184965 657 ntBASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh15Q99PJ1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Mir6979-201ENSMUST00000183927 56 ntBASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.67■□□□□ 0.1
Pcdh15Q99PJ1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms