Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.25■□□□□ 0.03
Tlr3Q99MB1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tlr3Q99MB1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Gm5566-201ENSMUST00000116118 459 ntBASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Gm15957-201ENSMUST00000118893 974 ntBASIC15.24■□□□□ 0.03
Tlr3Q99MB1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Gm27631-201ENSMUST00000184163 466 ntBASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tlr3Q99MB1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Gm9719-201ENSMUST00000162765 543 ntBASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Gm5779-201ENSMUST00000218467 910 ntBASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tlr3Q99MB1 BC001981-202ENSMUST00000191393 1545 ntBASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Gm8584-201ENSMUST00000171982 758 ntBASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Gm45453-201ENSMUST00000211758 853 ntBASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tlr3Q99MB1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms