Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx6-1Q99MA9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gm12928-201ENSMUST00000117115 573 ntBASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gm29649-201ENSMUST00000185649 419 ntBASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gm7287-201ENSMUST00000205267 602 ntBASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx6-1Q99MA9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx6-1Q99MA9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx6-1Q99MA9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms