Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.44□□□□□ -0.42
Scrt1Q99M85 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Mir6392-201ENSMUST00000184924 108 ntBASIC12.44□□□□□ -0.42
Scrt1Q99M85 Gm28760-201ENSMUST00000185995 736 ntBASIC12.44□□□□□ -0.42
Scrt1Q99M85 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.44□□□□□ -0.42
Scrt1Q99M85 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.44□□□□□ -0.42
Scrt1Q99M85 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scrt1Q99M85 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.43□□□□□ -0.42
Scrt1Q99M85 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Gm3436-201ENSMUST00000179930 840 ntBASIC12.43□□□□□ -0.42
Scrt1Q99M85 Gm27631-201ENSMUST00000184163 466 ntBASIC12.43□□□□□ -0.42
Scrt1Q99M85 Gm27892-201ENSMUST00000185017 106 ntBASIC12.43□□□□□ -0.42
Scrt1Q99M85 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.43□□□□□ -0.42
Scrt1Q99M85 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.43□□□□□ -0.42
Scrt1Q99M85 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Scrt1Q99M85 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scrt1Q99M85 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms