Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Gm6973-201ENSMUST00000117080 721 ntBASIC12.92□□□□□ -0.34
Lims1Q99JW4 Gm15467-201ENSMUST00000120582 445 ntBASIC12.92□□□□□ -0.34
Lims1Q99JW4 Gm11594-201ENSMUST00000122313 162 ntBASIC12.92□□□□□ -0.34
Lims1Q99JW4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Gm9727-201ENSMUST00000161387 555 ntBASIC12.92□□□□□ -0.34
Lims1Q99JW4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.92□□□□□ -0.34
Lims1Q99JW4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.91□□□□□ -0.34
Lims1Q99JW4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Gm5264-201ENSMUST00000190584 848 ntBASIC12.91□□□□□ -0.34
Lims1Q99JW4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.91□□□□□ -0.34
Lims1Q99JW4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.91□□□□□ -0.34
Lims1Q99JW4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lims1Q99JW4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.9□□□□□ -0.34
Lims1Q99JW4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.9□□□□□ -0.34
Lims1Q99JW4 Gm15957-201ENSMUST00000118893 974 ntBASIC12.9□□□□□ -0.34
Lims1Q99JW4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.9□□□□□ -0.34
Lims1Q99JW4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Gm20553-201ENSMUST00000204205 844 ntBASIC12.9□□□□□ -0.34
Lims1Q99JW4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.9□□□□□ -0.34
Lims1Q99JW4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Grk6-205ENSMUST00000224653 2976 ntBASIC12.9□□□□□ -0.34
Lims1Q99JW4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lims1Q99JW4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms