Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.38■□□□□ 0.21
Smc1bQ920F6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.38■□□□□ 0.21
Smc1bQ920F6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.38■□□□□ 0.21
Smc1bQ920F6 Mir1897-201ENSMUST00000122581 272 ntBASIC16.38■□□□□ 0.21
Smc1bQ920F6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Smc1bQ920F6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Gm43630-201ENSMUST00000201550 776 ntBASIC16.38■□□□□ 0.21
Smc1bQ920F6 Gm6007-201ENSMUST00000208170 823 ntBASIC16.38■□□□□ 0.21
Smc1bQ920F6 Gm46209-201ENSMUST00000217912 553 ntBASIC16.38■□□□□ 0.21
Smc1bQ920F6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.37■□□□□ 0.21
Smc1bQ920F6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Gm37917-201ENSMUST00000194711 392 ntBASIC16.37■□□□□ 0.21
Smc1bQ920F6 Gm43703-201ENSMUST00000200523 763 ntBASIC16.37■□□□□ 0.21
Smc1bQ920F6 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.37■□□□□ 0.21
Smc1bQ920F6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Smc1bQ920F6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Gm3436-201ENSMUST00000179930 840 ntBASIC16.36■□□□□ 0.21
Smc1bQ920F6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.36■□□□□ 0.21
Smc1bQ920F6 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.36■□□□□ 0.21
Smc1bQ920F6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc1bQ920F6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc1bQ920F6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms