Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Gm43094-201ENSMUST00000196549 921 ntBASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Gm5356-201ENSMUST00000093326 615 ntBASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb5Q91XZ5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Gm13385-201ENSMUST00000121089 220 ntBASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Gm8927-201ENSMUST00000181978 981 ntBASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Gm3222-201ENSMUST00000071282 990 ntBASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb5Q91XZ5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb5Q91XZ5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhb5Q91XZ5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms