Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb6Q91XZ4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb6Q91XZ4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Pcdhb6Q91XZ4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb6Q91XZ4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb6Q91XZ4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb6Q91XZ4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb6Q91XZ4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb6Q91XZ4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Pcdhb6Q91XZ4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Gm6415-201ENSMUST00000118488 348 ntBASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Gm26308-201ENSMUST00000157768 69 ntBASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb6Q91XZ4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 AA543401-201ENSMUST00000164248 1269 ntBASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb6Q91XZ4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb6Q91XZ4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Gm24543-201ENSMUST00000103867 82 ntBASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb6Q91XZ4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms