Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm12341-201ENSMUST00000119724 503 ntBASIC15.07■□□□□ 0
TraipQ8VIG6 Gm12091-201ENSMUST00000146791 830 ntBASIC15.07■□□□□ 0
TraipQ8VIG6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.07■□□□□ 0
TraipQ8VIG6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
TraipQ8VIG6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.07■□□□□ 0
TraipQ8VIG6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TraipQ8VIG6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TraipQ8VIG6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.06■□□□□ 0
TraipQ8VIG6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.06■□□□□ 0
TraipQ8VIG6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.06■□□□□ 0
TraipQ8VIG6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.06■□□□□ 0
TraipQ8VIG6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Gm27701-201ENSMUST00000184498 110 ntBASIC15.06■□□□□ 0
TraipQ8VIG6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.06■□□□□ 0
TraipQ8VIG6 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.06■□□□□ 0
TraipQ8VIG6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.06■□□□□ 0
TraipQ8VIG6 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.06■□□□□ 0
TraipQ8VIG6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.06■□□□□ 0
TraipQ8VIG6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.06■□□□□ 0
TraipQ8VIG6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.06■□□□□ 0
TraipQ8VIG6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.06■□□□□ 0
TraipQ8VIG6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
TraipQ8VIG6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TraipQ8VIG6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.06■□□□□ 0
TraipQ8VIG6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.05■□□□□ 0
TraipQ8VIG6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.05■□□□□ 0
TraipQ8VIG6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TraipQ8VIG6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TraipQ8VIG6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TraipQ8VIG6 Gm13385-201ENSMUST00000121089 220 ntBASIC15.05■□□□□ -0
TraipQ8VIG6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.05■□□□□ -0
TraipQ8VIG6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.05■□□□□ -0
TraipQ8VIG6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.05■□□□□ -0
TraipQ8VIG6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.05■□□□□ -0
TraipQ8VIG6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.05■□□□□ -0
TraipQ8VIG6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.05■□□□□ -0
TraipQ8VIG6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.05■□□□□ -0
TraipQ8VIG6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.05■□□□□ -0
TraipQ8VIG6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TraipQ8VIG6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.05■□□□□ -0
TraipQ8VIG6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TraipQ8VIG6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TraipQ8VIG6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ -0
TraipQ8VIG6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TraipQ8VIG6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TraipQ8VIG6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TraipQ8VIG6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TraipQ8VIG6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC15.04■□□□□ -0
TraipQ8VIG6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms