Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Q8VDP2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.85□□□□□ -0.19
Q8VDP2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q8VDP2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q8VDP2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.85□□□□□ -0.19
Q8VDP2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.85□□□□□ -0.19
Q8VDP2 Gm5587-201ENSMUST00000206270 674 ntBASIC13.85□□□□□ -0.19
Q8VDP2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Q8VDP2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Q8VDP2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q8VDP2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q8VDP2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q8VDP2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q8VDP2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q8VDP2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.85□□□□□ -0.19
Q8VDP2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.84□□□□□ -0.19
Q8VDP2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Q8VDP2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Q8VDP2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.84□□□□□ -0.19
Q8VDP2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.84□□□□□ -0.19
Q8VDP2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Q8VDP2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Q8VDP2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Q8VDP2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Q8VDP2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Q8VDP2 Celf4-206ENSMUST00000224553 1729 ntBASIC13.84□□□□□ -0.19
Q8VDP2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.84□□□□□ -0.19
Q8VDP2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Q8VDP2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q8VDP2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Q8VDP2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Q8VDP2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.83□□□□□ -0.19
Q8VDP2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Q8VDP2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.83□□□□□ -0.2
Q8VDP2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Q8VDP2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Q8VDP2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Q8VDP2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Q8VDP2 Gm11355-201ENSMUST00000121120 306 ntBASIC13.83□□□□□ -0.2
Q8VDP2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Q8VDP2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Q8VDP2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Q8VDP2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.83□□□□□ -0.2
Q8VDP2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Q8VDP2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Q8VDP2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Q8VDP2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Q8VDP2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Q8VDP2 Gm18958-201ENSMUST00000174258 762 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms