Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Mir770-201ENSMUST00000103252 94 ntBASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc9Q8VC31 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 AA414768-201ENSMUST00000121924 1257 ntBASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc9Q8VC31 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Gm6623-201ENSMUST00000173570 544 ntBASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc9Q8VC31 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.04■□□□□ 0.32
Ccdc9Q8VC31 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms