Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Gm6973-201ENSMUST00000117080 721 ntBASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Gm10275-202ENSMUST00000168697 495 ntBASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Gm8584-201ENSMUST00000171982 758 ntBASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Gm10275-201ENSMUST00000092620 635 ntBASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vcpip1Q8CDG3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Gm17271-201ENSMUST00000165535 355 ntBASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vcpip1Q8CDG3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Gm11543-201ENSMUST00000120758 370 ntBASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Gm45612-201ENSMUST00000211320 160 ntBASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vcpip1Q8CDG3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms