Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Gm44855-201ENSMUST00000205725 362 ntBASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa4Q8CA71 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gm42612-201ENSMUST00000197986 623 ntBASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gm43170-201ENSMUST00000199827 612 ntBASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.4■□□□□ 0.22
Shisa4Q8CA71 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gm20445-201ENSMUST00000061905 565 ntBASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa4Q8CA71 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa4Q8CA71 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa4Q8CA71 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms