Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Gm6415-201ENSMUST00000118488 348 ntBASIC15.66■□□□□ 0.1
Trim9Q8C7M3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Gm16476-201ENSMUST00000221544 139 ntBASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim9Q8C7M3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 AA543401-201ENSMUST00000164248 1269 ntBASIC15.65■□□□□ 0.1
Trim9Q8C7M3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.65■□□□□ 0.1
Trim9Q8C7M3 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim9Q8C7M3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim9Q8C7M3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms