Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tsen54Q8C2A2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tsen54Q8C2A2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tsen54Q8C2A2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Tsen54Q8C2A2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tsen54Q8C2A2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tsen54Q8C2A2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Gm27646-201ENSMUST00000183989 110 ntBASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tsen54Q8C2A2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Mir5131-201ENSMUST00000175426 93 ntBASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Gm6550-201ENSMUST00000187574 993 ntBASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Gm2651-201ENSMUST00000203560 838 ntBASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tsen54Q8C2A2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms