Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Gm44855-201ENSMUST00000205725 362 ntBASIC15.72■□□□□ 0.11
Trim47Q8C0E3 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim47Q8C0E3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Gm24694-201ENSMUST00000180054 110 ntBASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Gm27663-201ENSMUST00000184839 110 ntBASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.71■□□□□ 0.11
Trim47Q8C0E3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Gm44608-201ENSMUST00000206827 855 ntBASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Gm25007-201ENSMUST00000083808 133 ntBASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim47Q8C0E3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim47Q8C0E3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Gm12585-201ENSMUST00000117307 290 ntBASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Gm15393-201ENSMUST00000120499 219 ntBASIC15.7■□□□□ 0.1
Trim47Q8C0E3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Gm6218-201ENSMUST00000219812 628 ntBASIC15.7■□□□□ 0.1
Trim47Q8C0E3 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim47Q8C0E3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim47Q8C0E3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms