Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scfd1Q8BRF7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scfd1Q8BRF7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scfd1Q8BRF7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scfd1Q8BRF7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Scfd1Q8BRF7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.16■□□□□ 0.18
Scfd1Q8BRF7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scfd1Q8BRF7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scfd1Q8BRF7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scfd1Q8BRF7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Gm24420-201ENSMUST00000176676 59 ntBASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scfd1Q8BRF7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Gm27701-201ENSMUST00000184498 110 ntBASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scfd1Q8BRF7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Gm15678-201ENSMUST00000117573 960 ntBASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Gm18187-201ENSMUST00000196476 984 ntBASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Gm18307-201ENSMUST00000206864 949 ntBASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.13■□□□□ 0.17
Scfd1Q8BRF7 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Scfd1Q8BRF7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms