Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm17795-201ENSMUST00000214505 757 ntBASIC15.03■□□□□ -0
Rd3Q8BRE0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rd3Q8BRE0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rd3Q8BRE0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rd3Q8BRE0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rd3Q8BRE0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rd3Q8BRE0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.02■□□□□ -0
Rd3Q8BRE0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rd3Q8BRE0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rd3Q8BRE0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rd3Q8BRE0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rd3Q8BRE0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rd3Q8BRE0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rd3Q8BRE0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rd3Q8BRE0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.02■□□□□ -0
Rd3Q8BRE0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Rd3Q8BRE0 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.02■□□□□ -0
Rd3Q8BRE0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rd3Q8BRE0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.02■□□□□ -0
Rd3Q8BRE0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rd3Q8BRE0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.02■□□□□ -0
Rd3Q8BRE0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.02■□□□□ -0
Rd3Q8BRE0 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.02■□□□□ -0
Rd3Q8BRE0 Gm5354-201ENSMUST00000182417 973 ntBASIC15.02■□□□□ -0
Rd3Q8BRE0 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.02■□□□□ -0
Rd3Q8BRE0 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.02■□□□□ -0
Rd3Q8BRE0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rd3Q8BRE0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rd3Q8BRE0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rd3Q8BRE0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rd3Q8BRE0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Rd3Q8BRE0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rd3Q8BRE0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rd3Q8BRE0 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.02□□□□□ -0.01
Rd3Q8BRE0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rd3Q8BRE0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rd3Q8BRE0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rd3Q8BRE0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Gm15824-201ENSMUST00000119516 955 ntBASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Gm12341-201ENSMUST00000119724 503 ntBASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rd3Q8BRE0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Gm15806-201ENSMUST00000120696 955 ntBASIC15□□□□□ -0.01
Rd3Q8BRE0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15□□□□□ -0.01
Rd3Q8BRE0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Rd3Q8BRE0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15□□□□□ -0.01
Rd3Q8BRE0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rd3Q8BRE0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Rd3Q8BRE0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rd3Q8BRE0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms