Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpsf4Q8BQZ5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Gm25925-201ENSMUST00000158314 306 ntBASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Gm27920-201ENSMUST00000183953 96 ntBASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cpsf4Q8BQZ5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cpsf4Q8BQZ5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
Cpsf4Q8BQZ5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cpsf4Q8BQZ5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4Q8BQZ5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms