Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ubp1Q811S7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ubp1Q811S7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ubp1Q811S7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ubp1Q811S7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Gm9719-201ENSMUST00000162765 543 ntBASIC14.02□□□□□ -0.17
Ubp1Q811S7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Mir6956-201ENSMUST00000183598 62 ntBASIC14.02□□□□□ -0.17
Ubp1Q811S7 Gm38294-201ENSMUST00000192831 381 ntBASIC14.02□□□□□ -0.17
Ubp1Q811S7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubp1Q811S7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Gm5566-201ENSMUST00000116118 459 ntBASIC14.01□□□□□ -0.17
Ubp1Q811S7 Gm15693-201ENSMUST00000120470 637 ntBASIC14.01□□□□□ -0.17
Ubp1Q811S7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.01□□□□□ -0.17
Ubp1Q811S7 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.01□□□□□ -0.17
Ubp1Q811S7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Gm25007-201ENSMUST00000083808 133 ntBASIC14.01□□□□□ -0.17
Ubp1Q811S7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubp1Q811S7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14□□□□□ -0.17
Ubp1Q811S7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14□□□□□ -0.17
Ubp1Q811S7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14□□□□□ -0.17
Ubp1Q811S7 Gm27622-201ENSMUST00000183779 60 ntBASIC14□□□□□ -0.17
Ubp1Q811S7 Gm27631-201ENSMUST00000184163 466 ntBASIC14□□□□□ -0.17
Ubp1Q811S7 Gm28630-201ENSMUST00000187806 498 ntBASIC14□□□□□ -0.17
Ubp1Q811S7 Gm44882-201ENSMUST00000205702 802 ntBASIC14□□□□□ -0.17
Ubp1Q811S7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14□□□□□ -0.17
Ubp1Q811S7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Ubp1Q811S7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Ubp1Q811S7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Ubp1Q811S7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ubp1Q811S7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Ubp1Q811S7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubp1Q811S7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Ubp1Q811S7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ubp1Q811S7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms