Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Upk3bQ80YF6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Upk3bQ80YF6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Gm5479-201ENSMUST00000160578 435 ntBASIC12□□□□□ -0.49
Upk3bQ80YF6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 AC131690.1-201ENSMUST00000218406 374 ntBASIC12□□□□□ -0.49
Upk3bQ80YF6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12□□□□□ -0.49
Upk3bQ80YF6 Gm15889-202ENSMUST00000212669 2443 ntBASIC12□□□□□ -0.49
Upk3bQ80YF6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Upk3bQ80YF6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3bQ80YF6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Upk3bQ80YF6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Upk3bQ80YF6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Gm10275-202ENSMUST00000168697 495 ntBASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Gm10275-201ENSMUST00000092620 635 ntBASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.99□□□□□ -0.49
Upk3bQ80YF6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms