Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nucks1Q80XU3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Gm11779-201ENSMUST00000118541 368 ntBASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Gm14494-201ENSMUST00000118786 435 ntBASIC15.17■□□□□ 0.02
Nucks1Q80XU3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Gm18057-201ENSMUST00000208220 503 ntBASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Gm45612-201ENSMUST00000211320 160 ntBASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nucks1Q80XU3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Gm2810-201ENSMUST00000118681 990 ntBASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nucks1Q80XU3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nucks1Q80XU3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms