Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Usp8Q80U87 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Usp8Q80U87 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Usp8Q80U87 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Gm9385-201ENSMUST00000117563 472 ntBASIC14.26□□□□□ -0.13
Usp8Q80U87 Gm9182-201ENSMUST00000217829 639 ntBASIC14.26□□□□□ -0.13
Usp8Q80U87 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.26□□□□□ -0.13
Usp8Q80U87 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp8Q80U87 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.26□□□□□ -0.13
Usp8Q80U87 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp8Q80U87 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp8Q80U87 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp8Q80U87 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.25□□□□□ -0.13
Usp8Q80U87 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp8Q80U87 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.25□□□□□ -0.13
Usp8Q80U87 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp8Q80U87 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp8Q80U87 Gm5364-201ENSMUST00000216789 889 ntBASIC14.25□□□□□ -0.13
Usp8Q80U87 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp8Q80U87 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp8Q80U87 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usp8Q80U87 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp8Q80U87 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.24□□□□□ -0.13
Usp8Q80U87 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp8Q80U87 Gm14042-201ENSMUST00000120139 833 ntBASIC14.24□□□□□ -0.13
Usp8Q80U87 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.24□□□□□ -0.13
Usp8Q80U87 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.24□□□□□ -0.13
Usp8Q80U87 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp8Q80U87 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp8Q80U87 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp8Q80U87 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp8Q80U87 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms